Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | NCI_BARD1 SIGNALING EVENTS |
| Enrichment Score (ES) | 0.58270353 |
| Normalized Enrichment Score (NES) | 1.8417925 |
| Nominal p-value | 0.0072639226 |
| FDR q-value | 0.18527402 |
| FWER p-Value | 0.557 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | UBE2D3 | 1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at | 77 | 2.421 | 0.1397 | Yes | ||
| 2 | TP53 | 1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at | 161 | 2.024 | 0.2557 | Yes | ||
| 3 | EWSR1 | 1417238_at 1425919_at 1436884_x_at 1441074_at 1456461_at | 342 | 1.629 | 0.3438 | Yes | ||
| 4 | PRKDC | 1451576_at | 457 | 1.506 | 0.4277 | Yes | ||
| 5 | CSTF1 | 1417117_at 1448597_at | 1370 | 0.997 | 0.4451 | Yes | ||
| 6 | ATR | 1427197_at 1438921_at 1445091_at | 1630 | 0.942 | 0.4890 | Yes | ||
| 7 | TOPBP1 | 1452241_at 1458480_at | 2016 | 0.851 | 0.5218 | Yes | ||
| 8 | XRCC6 | 1417437_at 1428504_at 1442250_at | 2329 | 0.781 | 0.5537 | Yes | ||
| 9 | MRE11A | 1416748_a_at 1441990_at 1458509_at | 2623 | 0.716 | 0.5827 | Yes | ||
| 10 | NBN | 1448746_at | 4217 | 0.471 | 0.5378 | No | ||
| 11 | ATM | 1421205_at 1428830_at | 4327 | 0.459 | 0.5600 | No | ||
| 12 | NPM1 | 1415839_a_at 1420267_at 1420268_x_at 1420269_at 1432416_a_at | 5290 | 0.363 | 0.5376 | No | ||
| 13 | XRCC5 | 1451968_at | 5429 | 0.350 | 0.5520 | No | ||
| 14 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 6977 | 0.224 | 0.4947 | No | ||
| 15 | PCNA | 1417947_at | 7661 | 0.177 | 0.4739 | No | ||
| 16 | FANCC | 1442265_at 1447632_at 1450861_at | 9479 | 0.059 | 0.3945 | No | ||
| 17 | FANCL | 1423624_at 1432337_at | 9583 | 0.053 | 0.3929 | No | ||
| 18 | FANCA | 1418856_a_at 1452513_a_at | 9938 | 0.030 | 0.3785 | No | ||
| 19 | FANCE | 1424197_s_at 1453689_at | 11492 | -0.068 | 0.3117 | No | ||
| 20 | FANCG | 1420960_at | 12481 | -0.129 | 0.2742 | No | ||
| 21 | RAD51 | 1418281_at | 13482 | -0.193 | 0.2400 | No | ||
| 22 | BARD1 | 1420594_at | 13803 | -0.215 | 0.2381 | No | ||
| 23 | CCNE1 | 1416492_at 1441910_x_at | 14127 | -0.236 | 0.2373 | No | ||
| 24 | BRCA1 | 1424629_at 1424630_a_at 1427698_at 1443763_at 1451417_at | 14796 | -0.286 | 0.2237 | No | ||
| 25 | RAD50 | 1422630_at 1425939_at 1458970_at | 17091 | -0.478 | 0.1473 | No | ||
| 26 | CDK2 | 1416873_a_at 1447617_at | 17900 | -0.570 | 0.1442 | No | ||
| 27 | UBE2L3 | 1417907_at 1417908_s_at 1448879_at 1448880_at | 18651 | -0.675 | 0.1499 | No |
